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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs61774717 chr1:41735943 C/T 8.19E-5 490 14.97 17.75 17.7 KM Plot
THCA rs61779269 chr1:41665456 T/A 2.8E-7 490 14.92 17.77 17.47 KM Plot
THCA rs61779270 chr1:41670906 C/T 2.8E-7 490 14.92 17.77 17.47 KM Plot
THCA rs61780429 chr1:41457693 T/A 0.000218 474 14.9 17.63 15.9 KM Plot
THCA rs61780431 chr1:41464134 G/A 0.000215 476 14.9 17.63 15.9 KM Plot
THCA rs61781831 chr1:41633782 G/A 2.8E-7 490 14.92 17.77 17.47 KM Plot
THCA rs61781832 chr1:41636924 C/A 2.8E-7 490 14.92 17.77 17.47 KM Plot
THCA rs61792530 chr4:3145866 T/C 0.000172 485 17.1 13.68 15.17 KM Plot
THCA rs61858979 chr10:81815290 T/C 0.000253 490 16.08 15.9 11.73 KM Plot
THCA rs61858980 chr10:81816618 G/A 0.000259 489 16.08 15.98 11.73 KM Plot
THCA rs61858982 chr10:81820034 G/A 0.000253 489 16.2 15.9 11.73 KM Plot
THCA rs61859008 chr10:81831711 C/G 0.00027 488 16.2 15.87 11.73 KM Plot
THCA rs61859012 chr10:81844281 A/G 0.000212 488 15.9 17.23 9.77 KM Plot
THCA rs61859013 chr10:81846062 C/T 0.000145 488 15.97 16.07 9.77 KM Plot
THCA rs61859014 chr10:81849184 C/T 0.000212 488 15.9 17.23 9.77 KM Plot